Course detail

LCF5833 - Statistical Inference in Forestry Research


Credit hours

In-class work
per week
Practice
per week
Credits
Duration
Total
5
2
8
15 weeks
120 hours

Instructor
João Luis Ferreira Batista

Objective
Present and discuss the main forms of statistical inferences and their application in forest research, given the emphasis on hypothesis testing techniques of Classical Inference and Likelihood Inference.

Content
1. Scientific Inference and Statistical Inference: Scientific knowledge; Practical knowledge; Articulation between theory and empirical; Hypotheses, Models and Data; Data: Surveys and Experiments; Strength of inference; Causes: fixed factors and random factors; Bases of Inference: Design and Model; Measurement, estimation and prediction; Interpolation and Extrapolation.
2. Fundamentals of Statistical Inference: The Concept of Stochastic Models; Discrete Families: Binomial, Poisson, Negative Binomial; Continuous Families: Exponential, Gaussian, Weibull; Properties of stochastic models; Relationship between distribution families.
3. Classic Inference: Hypothesis Test: Sample distributions: Z, t, Chi-square and F; Neyman-Pearson Paradigm; Statistical Hypotheses and Inference Errors; Fisher's Hypothesis Test; Student's Test t; Chi-Square Test; Test F and analysis of experiments;
4. Classical Inference: Regression: Simple Linear Model; Multiple Linear Model; Estimates by Minimum Squares; Inference with regression models;
5. Inference by Likelihood: Stochastic Scenario and Models; Operant model, approach model and discrepancies; Likelihood Axiom; Likelihood and Estimation Function; Hypothesis Testing by Model Comparison.

Bibliography
Anderson, D.; Burnham, K. & Thompson, W. Null hypothesis testing:
problems, prevalence, and an alternative.
Journal of Wildlife Management, 2000, 64, 921-923.

Anderson, D. R. & Burnham, K. P. Avoiding Pitfalls When Using
Information-Theoretic Methods.
The Journal of Wildlife Management, 2002, 66, 912-918.

Bolker, B. Integreating ecological models and data in R.
Princeton University Press, 2006.

Burnham, K. P. & Anderson, D. R. Model selection and multimodel inference:
a pratical information-theoretic approach.
Springer-Verlag, 2002.

Graeme D. Ruxton The unequal variance t-test is an underused alternative
to Student's t-test and the Mann–Whitney U test.
Behavioral Ecology, 2006, 17, 688–690.

Fischer, C. & Schonfelder, E. A modified growth function with
interpretable parameters applied to the age-height
relationship of individual trees.
Canadian Journal of Forest Research, 2017, 47, 166-173.

Hilborn, R. & Mangel, M. The ecological detective: confronting
models with data.
Princeton University Press, 1997.

Hobbs, N. & Hilborn, R. Alternatives to statistical hypothesis
testing in Ecology: a guide to self teaching.
Ecological Applications, 2006, 16, 5-19.

Johnson, J. B. & Omland, K. S. Model selection in ecology and evolution.
TRENDS in Ecology and Evolution, 2004, 19, 101-108.

Lai, J.; Coomes, D. A.; Du, X.; Hsieh, C.-f.; Sun, I.-F.;
Chao, W.-C.; Mi, X.; Ren, H.; Wang, X.; Hao, Z. & Ma, K.
A general combined model to describe tree-diameter distributions
within subtropical and temperate forest communities.
Oikos, 2013, 122, 1636-1642.

Lehmann, E. The Fisher, Neyman-Pearson theories of testing hypotheses:
one theory or two?
Journal of the American Statistical Asssociation, 1993, 88,
1242-1249.

Lehmann, E. L. Fisher, Neyman, and the Creation of Classical Statistics
Springer, 2011.

Lima, R.A.F. de; Batista, J.L.F. & Prado, P.I. Modeling Tree Diameter
Distributions in natural Forests: An Evaluation of 10 Statistical
Models.
Forest Science, 61, 320-327.

Royall, R. Statistical evidence: a likelihood paradigm.
Chapman & Hall, 1997

Sober, E. Likelihood, Model Selection, and the Duhem-Quine Problem.
The Journal of Philosophy, 2004, C1, 221-241.

Sober, E. Instrumentalism, Parsimony, and the Akaike Framework.
Philosophy of Science, 2002, 69, S112-S123.

Subedi, M. R. & Sharma, R. P. Allometric biomass models for bark
of Cinnamomum tamala in mid-hill of Nepal.
Biomass & BIoenergy, 2012, 47, 44-49.

Taubert, F.; Hartig, F.; Dobner, H.-J. & Huth, A. On the Challenge
of Fitting Tree Size Distributions in Ecology.
PLoS ONE, 2013, 8, e58036.